This site is maintained by Ms. Baker and her high school biology students. We live in the Northeast U.S. and blog about anything biology-related.
If you have any content requests or would like to be a guest blogger, please contact us at extremebiology@gmail.com
If you'd like more info on the reason why we blog and the history of our blog, please visit our "Who is Extreme Biology" page. Thanks for visiting!
Why do these scientists love PCR so much? What is it? How does it work?
http://jim.hutchins.name Jim Hutchins
In Ye Olden Days of Yore, before PCR, it was almost impossible to amplify DNA. (And, as the British say, amplifying RNA was Right Out.)
Let’s say you had a little bit of DNA, maybe just a few dozen molecules from a crime scene. (Remember that a few dozen molecules is maybe 10^-20 moles of DNA, a very very very small number.) Before PCR and before thermostable DNA polymerase, you had to have three water baths set up, at three different temperatures, and you had to physically move the tube with your sample from one water bath to another. Each “round” as you came around to the lowest temperature bath (what we call the annealing temperature), you would have to get out your micropipet and put in more DNA polymerase. It was tedious, it cost a fortune, and no one had invented trip-hop music yet so you couldn’t even stay awake.
After PCR and thermostable DNA polymerase (e.g. Taq), all we had to do was just set up the reactions, put them in the thermal cycler, and go home to our pets and families. Everyone was happier.
http://plague-erism.blogspot.com/ amy breslin
Yes… these videos are amazing! I posted these on my blog last semester
Matt C.
PCR stands for polymerase chain reaction according to http://www.uq.edu.au/vdu/PDU_PCR.htm. This website also said PCR is a “…technique for copying a piece of DNA a billion-fold.”
Jesse
Scientists love PCR because it basically amplifies DNA and also ever since they came out they have cloned cells and it makes everything easier for scientists. PCR stands for polymerase chain reaction and it works based on the ability of a DNA polymerase enzyme that can synthesize a complimentary strand to a targeted segment of DNA in a test tube mixture consisting of only 4 DNA bases.
PCR is a polymerase chain reaction. It copies a piece of DNA and creates a chain of many pieces. PCR needs a DNA template to copy and oligonucleotides (also called primers) which are pairs of shirt DNA sequences.
1. Double-stranded DNA denaturation
2. Primer annealing to template DNA
3. Primer extension
Denaturation means that the weak hydrogen bonds are disrupted and make two single stranded DNA strands. Primer annealing is when primers collide at the annealing temperature and bind with their complementary sequences.
“PCR is a relatively simple and inexpensive tool that you can use to focus in on a segment of DNA and copy it billions of times over. PCR is used every day to diagnose diseases, identify bacteria and viruses, match criminals to crime scenes, and in many other ways.” This information was found on: http://learn.genetics.utah.edu/content/labs/pcr/
Also, “PCR amplification of a gene to make millions of copies, allows for detection and identification of gene sequences using visual techniques based on size and charge (+ or -) of the piece of DNA.” this information was found on: http://biotech.about.com/od/pcr/a/PCRtheory.htm
Deanna
PCR stands for Polymerase Chain Reaction. PCR enables millions of copies of a specific strand of DNA, or deoxyribonucleic acid, to be produced in approximately two hours. This whole process of copying requires the use of bacteria for amplifying DNA. The first step of this process starts with a denaturing step. Different samples of specific DNA are heated to 94- 96 degrees C for one to several minutes to denature, separate into single strands. After you’ve done that the temperature is lowered to 50- 65 C. By doing this step it allows the left and right primers to anneal, base pair, to their complementary sequences, causing the DNA sequence to be amplified. Following that step, the temperature is then again raised to 72 degrees C for one to several minutes. This allows each polymerase to attach to each priming site and synthesize a new DNA strand. And last, but not least the cycle is repeated to make another strand of specific DNA. The site I found this information on was : http://www.dnalc.org/resources/animations/pcr.html.